rnaC [2020-09-09 16:26:54]

small RNA, controls AbrB expression

locus: new_2773764_2773889

pI: 0.00

mw: 0.00 kDa

gene length: 126 bp

function: control of AbrB-mediated heterogeneity

product: small RNA, controls AbrB expression

essential: no

synonyms: S1022

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.5|Regulatory RNAs]

Gene

Coordinates: 2,773,764 → 2,773,889

Phenotypes of a mutant

• increased growth yield on minimal media [Pubmed|25790031]
• increased levels of [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB] [Pubmed|25790031]

The protein

Catalyzed reaction/ biological activity

• forms a hybrid with the ''[gene|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]'' mRNA to trigger its degradation [Pubmed|25790031]

[SW|Interactions]

• [protein|BECA96CF7ABCBB3DB9AED0B2204BBE03EB4B2CD7|RnaC]-mRNA of ''[gene|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]'' [Pubmed|25790031]

Expression and Regulation

Operons

• genes: [gene|BECA96CF7ABCBB3DB9AED0B2204BBE03EB4B2CD7|rnaC]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|22383849], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]

References

• 25790031,22383849